Transcript: ENSDART00000173340.2 tbce-207

Description

tubulin folding cofactor E [Source:ZFIN;Acc:ZDB-GENE-051030-120]

Gene Synonyms

zgc:123075

Location

Chromosome 11: 44,615,067-44,622,250 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 13 domains and features, is associated with 9 variant alleles and maps to 125 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000099921.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000171837.2	tbce-203	2616	521aa	ENSDARP00000132970.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5U378	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000160639.3	tbce-201	3175	521aa	ENSDARP00000131097.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5U378	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173340.2	tbce-207	833	264aa	ENSDARP00000142457.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000172258.2	tbce-204	806	239aa	ENSDARP00000138413.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000173366.2	tbce-208	852	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000171471.2	tbce-202	896	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000173224.2	tbce-206	874	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000172932.2	tbce-205	547	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 833 bps, Translation length: 264 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000173340.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000173340.2 tbce-207

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Transcript: ENSDART00000173340.2 tbce-207

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