Transcript: ENSDART00000173335.2 bcorl1-202

Description

BCL6 corepressor-like 1 [Source:ZFIN;Acc:ZDB-GENE-130530-838]

Gene Synonyms

zmp:0000000835

Location

About this transcript

This transcript has 2 exons and is associated with 267 variant alleles.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000111480.5	bcorl1-201	6220	1514aa	ENSDARP00000102285.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M2BKM1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000190857.1	bcorl1-203	3158	146aa	ENSDARP00000152877.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000173335.2	bcorl1-202	237	2aa	ENSDARP00000142077.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 237 bps, Translation length: 2 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000173335.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]