Transcript: ENSDART00000173329.2 trappc10-206

Description

trafficking protein particle complex 10 [Source:ZFIN;Acc:ZDB-GENE-131115-1]

Gene Synonyms

wu:fc21a02

Location

Chromosome 11: 45,370,505-45,385,803 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 4 domains and features, is associated with 25 variant alleles and maps to 30 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000098118.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000166691.2	trappc10-201	3687	1228aa	ENSDARP00000141091.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2L8I2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000168770.3	trappc10-202	3905	763aa	ENSDARP00000141960.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2LAX4	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000173329.2	trappc10-206	1572	457aa	ENSDARP00000142397.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LGL8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000173310.2	trappc10-205	820	132aa	ENSDARP00000142585.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LH55	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000172817.2	trappc10-203	692	132aa	ENSDARP00000142556.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LH55	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000173297.2	trappc10-204	426	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,572 bps, Translation length: 457 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000173329.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000173329.2 trappc10-206

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Transcript: ENSDART00000173329.2 trappc10-206

Summary

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