Transcript: ENSDART00000173328.2 mesd-204

Description

mesoderm development LRP chaperone [Source:ZFIN;Acc:ZDB-GENE-070112-2142]

Gene Synonyms

mesdc2, zgc:158636

Location

About this transcript

This transcript has 4 exons, is associated with 292 variant alleles and maps to 109 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000172796.2	mesd-203	809	206aa	ENSDARP00000142197.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1L243-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000102515.5	mesd-201	1173	174aa	ENSDARP00000093291.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000163949.2	mesd-202	480	159aa	ENSDARP00000132522.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000173328.2	mesd-204	746	57aa	ENSDARP00000142589.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 4, Coding exons: 1, Transcript length: 746 bps, Translation length: 57 residues

Version

ENSDART00000173328.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.