Transcript: ENSDART00000173319.2 chrnb5b-202

Description

cholinergic receptor, nicotinic, beta 5b [Source:ZFIN;Acc:ZDB-GENE-120809-5]

Location

About this transcript

This transcript has 5 exons, is annotated with 37 domains and features, is associated with 796 variant alleles and maps to 143 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000173319.2	chrnb5b-202	5529	475aa	ENSDARP00000142507.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LGX8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000039985.7	chrnb5b-201	3423	505aa	ENSDARP00000039984.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 5,529 bps, Translation length: 475 residues

Version

ENSDART00000173319.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

RNA-Seq supported partial [Definitions]