Transcript: ENSDART00000173301.2 sfxn5b-202

Description

sideroflexin 5b [Source:ZFIN;Acc:ZDB-GENE-050706-107]

Gene Synonyms

wu:fc52e09, zgc:114137

Location

About this transcript

This transcript has 14 exons, is annotated with 20 domains and features, is associated with 455 variant alleles and maps to 114 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000173301.2	sfxn5b-202	4276	325aa	ENSDARP00000142582.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R7K0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000034606.6	sfxn5b-201	3603	325aa	ENSDARP00000037339.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R7K0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 4,276 bps, Translation length: 325 residues

Version

ENSDART00000173301.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.