Transcript: ENSDART00000173218.2 vimr2-201

Description

vimentin-related 2 [Source:ZFIN;Acc:ZDB-GENE-160113-76]

Gene Synonyms

si:dkey-76i15.1

Location

About this transcript

This transcript has 9 exons, is annotated with 15 domains and features, is associated with 1055 variant alleles and maps to 55 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000180458.1	vimr2-202	4696	414aa	ENSDARP00000145684.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q483	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000189271.1	vimr2-203	4624	390aa	ENSDARP00000149938.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q9K7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173218.2	vimr2-201	3102	358aa	ENSDARP00000142228.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LG50	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 3,102 bps, Translation length: 358 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000173218.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]