Transcript: ENSDART00000173217.2 prxl2b-203

Description

peroxiredoxin like 2B [Source:NCBI gene;Acc:406605]

Gene Synonyms

fam213b, prxl2, sb:cb782, selu3, wu:fc33a02, zgc:85644

Location

About this transcript

This transcript has 6 exons, is annotated with 6 domains and features, is associated with 293 variant alleles and maps to 76 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000147264.4	prxl2b-202	1461	201aa	ENSDARP00000113812.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QSW9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173276.2	prxl2b-204	708	137aa	ENSDARP00000142245.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LG67	-
ENSDART00000173217.2	prxl2b-203	658	192aa	ENSDARP00000142159.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LFY3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000139061.2	prxl2b-201	877	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 658 bps, Translation length: 192 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000173217.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.