Transcript: ENSDART00000173215.2 si:dkey-241l7.2-201

Description

si:dkey-241l7.2 [Source:ZFIN;Acc:ZDB-GENE-041014-240]

Location

Chromosome 20: 54,034,726-54,035,844 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 23 domains and features, is associated with 9 variant alleles and maps to 127 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000105335.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000173226.2	si:dkey-241l7.2-202	753	153aa	ENSDARP00000142290.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LFS0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173215.2	si:dkey-241l7.2-201	621	153aa	ENSDARP00000142226.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LFS0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173317.2	si:dkey-241l7.2-203	568	153aa	ENSDARP00000142094.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LFS0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 621 bps, Translation length: 153 residues

Version

ENSDART00000173215.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000173215.2 si:dkey-241l7.2-201

Summary

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Transcript: ENSDART00000173215.2 si:dkey-241l7.2-201

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