Transcript: ENSDART00000173162.2 hpda-202

Description

4-hydroxyphenylpyruvate dioxygenase a [Source:ZFIN;Acc:ZDB-GENE-040426-986]

Location

About this transcript

This transcript has 9 exons, is associated with 220 variant alleles and maps to 39 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000020472.8	hpda-201	1787	397aa	ENSDARP00000016115.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q6E1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173162.2	hpda-202	735	127aa	ENSDARP00000142179.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 9, Coding exons: 7, Transcript length: 735 bps, Translation length: 127 residues

Version

ENSDART00000173162.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.