Transcript: ENSDART00000173108.2 GPC3-201

Description

glypican 3 [Source:ZFIN;Acc:ZDB-GENE-031212-1]

Location

About this transcript

This transcript has 8 exons, is annotated with 20 domains and features, is associated with 5053 variant alleles and maps to 276 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000173108.2	GPC3-201	2558	590aa	ENSDARP00000142166.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6V9Y8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,558 bps, Translation length: 590 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6V9Y8

Version

ENSDART00000173108.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.