Transcript: ENSDART00000173097.2 ZZEF1-202

Description

zinc finger, ZZ-type with EF hand domain 1 [Source:ZFIN;Acc:ZDB-GENE-041222-2]

Location

About this transcript

This transcript has 5 exons, is annotated with 3 domains and features, is associated with 414 variant alleles and maps to 19 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000162121.3	ZZEF1-203	9117	3038aa	ENSDARP00000141398.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9P8V5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141463.3	ZZEF1-201	11266	3027aa	ENSDARP00000114487.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000173097.2	ZZEF1-202	539	179aa	ENSDARP00000142444.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 539 bps, Translation length: 179 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000173097.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.