Transcript: ENSDART00000173090.2 mtus1a-205

Description

microtubule associated tumor suppressor 1a [Source:ZFIN;Acc:ZDB-GENE-061103-409]

Gene Synonyms

fa17d11, wu:fa17d11, wu:fi18f08, zgc:154168

Location

Chromosome 14: 30,285,613-30,357,641 forward strand.

About this transcript

This transcript has 15 exons, is annotated with 31 domains and features, is associated with 2158 variant alleles and maps to 372 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000071562.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000105889.5	mtus1a-201	2792	440aa	ENSDARP00000096667.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R2R1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173090.2	mtus1a-205	5058	1112aa	ENSDARP00000142534.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LH04	-
ENSDART00000173004.2	mtus1a-204	1908	508aa	ENSDARP00000142192.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000148448.2	mtus1a-202	688	204aa	ENSDARP00000123866.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000149765.2	mtus1a-203	547	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 5,058 bps, Translation length: 1,112 residues

Version

ENSDART00000173090.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

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Transcript: ENSDART00000173090.2 mtus1a-205

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Transcript: ENSDART00000173090.2 mtus1a-205

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