Transcript: ENSDART00000173087.2 eif4g3a-201

Description

eukaryotic translation initiation factor 4 gamma, 3a [Source:ZFIN;Acc:ZDB-GENE-120810-2]

Location

Chromosome 11: 27,834,614-27,838,621 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 6 domains and features, is associated with 200 variant alleles and maps to 38 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000077215.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000173219.2	eif4g3a-202	6444	1711aa	ENSDARP00000142418.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LGN9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182136.1	eif4g3a-205	5358	1319aa	ENSDARP00000152880.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000187587.1	eif4g3a-206	5349	1316aa	ENSDARP00000146015.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000173087.2	eif4g3a-201	615	171aa	ENSDARP00000142511.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000180579.1	eif4g3a-204	204	67aa	ENSDARP00000156160.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000173283.2	eif4g3a-203	925	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 615 bps, Translation length: 171 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000173087.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000173087.2 eif4g3a-201

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Transcript: ENSDART00000173087.2 eif4g3a-201

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