Transcript: ENSDART00000173050.2 afmid-208

Description

arylformamidase [Source:ZFIN;Acc:ZDB-GENE-050417-166]

Gene Synonyms

im:7148587, zgc:112472

Location

Chromosome 11: 45,141,581-45,152,956 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 7 domains and features, is associated with 109 variant alleles and maps to 87 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000099106.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000170993.2	afmid-205	1413	269aa	ENSDARP00000131858.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32U3A6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000168066.2	afmid-203	1780	293aa	ENSDARP00000140792.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IZ99	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000167540.2	afmid-202	1044	278aa	ENSDARP00000138038.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000170795.2	afmid-204	860	249aa	ENSDARP00000132326.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000172878.2	afmid-207	796	258aa	ENSDARP00000142282.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000173050.2	afmid-208	680	226aa	ENSDARP00000142536.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000171894.2	afmid-206	794	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000160656.2	afmid-201	677	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 680 bps, Translation length: 226 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000173050.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000173050.2 afmid-208

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Transcript: ENSDART00000173050.2 afmid-208

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