Transcript: ENSDART00000173027.2 mmel1-201

Description

membrane metallo-endopeptidase-like 1 [Source:ZFIN;Acc:ZDB-GENE-101112-2]

Location

Chromosome 11: 40,597,563-40,603,087 forward strand.

About this transcript

This transcript has 4 exons, is associated with 175 variant alleles and maps to 126 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000105389.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000173239.2	mmel1-202	3375	765aa	ENSDARP00000142601.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LH71	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000175424.2	mmel1-203	2476	765aa	ENSDARP00000144580.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LH71	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000184673.1	mmel1-204	2446	755aa	ENSDARP00000151173.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000173027.2	mmel1-201	517	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 517 bps,

Version

ENSDART00000173027.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000173027.2 mmel1-201

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Transcript: ENSDART00000173027.2 mmel1-201

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