Transcript: ENSDART00000172986.2 rfc4-206

Description

replication factor C (activator 1) 4 [Source:NCBI gene (formerly Entrezgene);Acc:406435]

Location

Chromosome 11: 45,430,084-45,435,014 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 9 domains and features, is associated with 10 variant alleles and maps to 113 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000042458.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000163923.2	rfc4-202	1077	358aa	ENSDARP00000130135.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173106.2	rfc4-207	1622	206aa	ENSDARP00000142499.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000172986.2	rfc4-206	811	229aa	ENSDARP00000142584.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000172767.2	rfc4-203	809	229aa	ENSDARP00000142510.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000075612.6	rfc4-201	609	202aa	ENSDARP00000070094.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000173111.2	rfc4-208	441	97aa	ENSDARP00000142388.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000172933.2	rfc4-204	305	49aa	ENSDARP00000142407.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000172941.2	rfc4-205	638	38aa	ENSDARP00000142250.1	Nonsense mediated decay	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 811 bps, Translation length: 229 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000172986.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000172986.2 rfc4-206

Summary

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Transcript: ENSDART00000172986.2 rfc4-206

Summary

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