Transcript: ENSDART00000172979.2 cabp2b-203

Description

calcium binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-081028-55]

Gene Synonyms

si:ch211-113d11.4

Location

Chromosome 14: 46,268,248-46,274,856 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 4 domains and features, is associated with 445 variant alleles and maps to 12 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000052277.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000074099.6	cabp2b-201	648	215aa	ENSDARP00000068588.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000173428.2	cabp2b-205	2724	54aa	ENSDARP00000142106.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000183620.1	cabp2b-206	1460	163aa	ENSDARP00000152788.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QK74	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000172979.2	cabp2b-203	917	54aa	ENSDARP00000142244.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000134363.3	cabp2b-202	889	202aa	ENSDARP00000114924.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000173069.2	cabp2b-204	512	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 917 bps, Translation length: 54 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000172979.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

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Transcript: ENSDART00000172979.2 cabp2b-203

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Transcript: ENSDART00000172979.2 cabp2b-203

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