Transcript: ENSDART00000172978.2 atp13a3-201

Description

ATPase 13A3 [Source:ZFIN;Acc:ZDB-GENE-120521-1]

Location

Chromosome 11: 34,154,593-34,188,346 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 9 domains and features, is associated with 585 variant alleles and maps to 81 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000076622.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000173216.2	atp13a3-203	3041	471aa	ENSDARP00000142073.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000181571.1	atp13a3-205	914	81aa	ENSDARP00000155483.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000172978.2	atp13a3-201	748	136aa	ENSDARP00000142072.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000173275.2	atp13a3-204	294	97aa	ENSDARP00000142400.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000173039.2	atp13a3-202	207	69aa	ENSDARP00000142383.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 748 bps, Translation length: 136 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000172978.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

Transcript: ENSDART00000172978.2 atp13a3-201

Summary

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Transcript: ENSDART00000172978.2 atp13a3-201

Summary

About Us

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