Transcript: ENSDART00000172976.2 cdpf1-205

Description

cysteine rich DPF motif domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-170]

Gene Synonyms

si:ch211-239e6.4, zgc:136265, zgc:152667

Location

Chromosome 4: 18,603,010-18,606,531 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 353 variant alleles and maps to 138 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000095705.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000173438.2	cdpf1-206	842	116aa	ENSDARP00000142576.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4I9K8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000137798.3	cdpf1-201	882	87aa	ENSDARP00000114819.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RGZ1	-
ENSDART00000172976.2	cdpf1-205	775	72aa	ENSDARP00000142450.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000171450.2	cdpf1-204	659	116aa	ENSDARP00000129970.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4I9K8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000184288.1	cdpf1-207	451	87aa	ENSDARP00000145478.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RGZ1	-
ENSDART00000141386.5	cdpf1-202	724	76aa	ENSDARP00000123930.2	Nonsense mediated decay	-	-
ENSDART00000148271.2	cdpf1-203	558	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 775 bps, Translation length: 72 residues

Version

ENSDART00000172976.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000172976.2 cdpf1-205

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Transcript: ENSDART00000172976.2 cdpf1-205

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