Transcript: ENSDART00000172958.2 map7d3-203

Description

MAP7 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-121129-3]

Location

Chromosome 14: 31,681,734-31,693,148 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 10 domains and features, is associated with 458 variant alleles and maps to 24 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000060771.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000127303.4	map7d3-201	2514	838aa	ENSDARP00000109109.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000173036.2	map7d3-204	4854	830aa	ENSDARP00000142609.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173435.2	map7d3-207	1789	591aa	ENSDARP00000142539.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000173274.2	map7d3-205	1340	446aa	ENSDARP00000142148.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000172958.2	map7d3-203	737	246aa	ENSDARP00000142139.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000172876.2	map7d3-202	655	211aa	ENSDARP00000142285.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000173353.2	map7d3-206	232	77aa	ENSDARP00000142436.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 737 bps, Translation length: 246 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000172958.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000172958.2 map7d3-203

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Transcript: ENSDART00000172958.2 map7d3-203

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