Transcript: ENSDART00000172949.2 pou2f2a-203

Description

POU class 2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-060310-2]

Gene Synonyms

Oct2a, id:ibd5128, pou2f2, si:dkey-3j24.1

Location

About this transcript

This transcript has 17 exons, is annotated with 49 domains and features, is associated with 1613 variant alleles and maps to 128 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000172949.2	pou2f2a-203	6951	695aa	ENSDARP00000142486.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LGV7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141032.2	pou2f2a-202	2309	485aa	ENSDARP00000115767.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q6P5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000049323.8	pou2f2a-201	1389	462aa	ENSDARP00000049322.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F4K0	-

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 6,951 bps, Translation length: 695 residues

Version

ENSDART00000172949.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]