Transcript: ENSDART00000172945.2 PHF6-201

Description

PHD finger protein 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5278]

Location

Chromosome 14: 31,488,579-31,498,755 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 10 domains and features, is associated with 180 variant alleles and maps to 91 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000004046.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000006463.7	PHF6-202	1920	363aa	ENSDARP00000023828.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000170683.2	PHF6-205	1123	363aa	ENSDARP00000137488.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173281.2	PHF6-204	926	195aa	ENSDARP00000142508.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000138341.2	PHF6-203	884	267aa	ENSDARP00000119583.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000172945.2	PHF6-201	810	241aa	ENSDARP00000142214.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 810 bps, Translation length: 241 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000172945.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000172945.2 PHF6-201

Summary

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Transcript: ENSDART00000172945.2 PHF6-201

Summary

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