Transcript: ENSDART00000172943.2 abcc6b.2-202

Description

ATP-binding cassette, sub-family C (CFTR/MRP), member 6b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-110208-2]

Gene Synonyms

abcc6c, zmp:0000001324

Location

Chromosome 3: 36,807,642-36,824,190 reverse strand.

About this transcript

This transcript has 31 exons, is annotated with 44 domains and features, is associated with 247 variant alleles and maps to 34 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000094901.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000172943.2	abcc6b.2-202	4934	1502aa	ENSDARP00000142471.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LGU2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000131340.3	abcc6b.2-201	4368	1455aa	ENSDARP00000118198.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QMR4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000185075.1	abcc6b.2-203	4326	1441aa	ENSDARP00000147229.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q3G7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 31, Coding exons: 31, Transcript length: 4,934 bps, Translation length: 1,502 residues

Version

ENSDART00000172943.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

Transcript: ENSDART00000172943.2 abcc6b.2-202

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Transcript: ENSDART00000172943.2 abcc6b.2-202

Summary

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