Transcript: ENSDART00000172915.2 slc12a10.3-203

Description

solute carrier family 12 member 10, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-060503-518]

Gene Synonyms

si:dkey-114c3.3

Location

Chromosome 7: 4,386,753-4,394,469 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 23 domains and features, is associated with 269 variant alleles and maps to 60 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000055253.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000134653.3	slc12a10.3-202	4187	996aa	ENSDARP00000118237.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1NLD8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000042955.7	slc12a10.3-201	4116	965aa	ENSDARP00000042954.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000172915.2	slc12a10.3-203	719	240aa	ENSDARP00000142509.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 719 bps, Translation length: 240 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000172915.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000172915.2 slc12a10.3-203

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Transcript: ENSDART00000172915.2 slc12a10.3-203

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