Transcript: ENSDART00000172896.2 zgc:173548-202

Description

zgc:173548 [Source:ZFIN;Acc:ZDB-GENE-070928-39]

Location

About this transcript

This transcript has 2 exons, is annotated with 6 domains and features, is associated with 208 variant alleles and maps to 51 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000102493.5	zgc:173548-201	1295	282aa	ENSDARP00000093270.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173242.2	zgc:173548-203	899	258aa	ENSDARP00000142475.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000172896.2	zgc:173548-202	511	58aa	ENSDARP00000142627.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 511 bps, Translation length: 58 residues

Version

ENSDART00000172896.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.