Transcript: ENSDART00000172874.2 KCNJ10-201

Description

potassium inwardly rectifying channel subfamily J member 10a [Source:ZFIN;Acc:ZDB-GENE-130726-1]

Location

About this transcript

This transcript has 6 exons, is annotated with 34 domains and features, is associated with 790 variant alleles and maps to 101 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000172874.2	KCNJ10-201	1843	425aa	ENSDARP00000142361.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FD27	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000160137.2	KCNJ10-202	1263	420aa	ENSDARP00000134949.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,843 bps, Translation length: 425 residues

Version

ENSDART00000172874.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]