Transcript: ENSDART00000172867.2 SNRPE-201

Description

small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]

Location

About this transcript

This transcript has 4 exons, is annotated with 25 domains and features, is associated with 411 variant alleles and maps to 119 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000050296.4	SNRPE-203	561	92aa	ENSDARP00000050295.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZUG0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173337.2	SNRPE-202	392	52aa	ENSDARP00000142173.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000172867.2	SNRPE-201	378	71aa	ENSDARP00000142199.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 378 bps, Translation length: 71 residues

Version

ENSDART00000172867.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.