Transcript: ENSDART00000172845.2 mdc1-202

Description

mediator of DNA damage checkpoint 1 [Source:ZFIN;Acc:ZDB-GENE-060810-185]

Gene Synonyms

im:7163673, sb:eu278, si:ch73-309n4.5

Location

About this transcript

This transcript has 7 exons, is annotated with 67 domains and features, is associated with 559 variant alleles and maps to 52 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000121966.3	mdc1-201	5745	1914aa	ENSDARP00000106038.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8N7T6W3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000172845.2	mdc1-202	5527	1786aa	ENSDARP00000142518.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 5,527 bps, Translation length: 1,786 residues

Version

ENSDART00000172845.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.