Transcript: ENSDART00000172834.2 pparg-201

Description

peroxisome proliferator-activated receptor gamma [Source:ZFIN;Acc:ZDB-GENE-990415-213]

Gene Synonyms

ARF6, PPAR[g], nr1c3

Location

About this transcript

This transcript has 7 exons, is annotated with 4 domains and features, is associated with 1277 variant alleles and maps to 123 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000172834.2	pparg-201	1359	116aa	ENSDARP00000142487.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LGV8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000173450.2	pparg-202	535	92aa	ENSDARP00000142399.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LGM0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 7, Coding exons: 2, Transcript length: 1,359 bps, Translation length: 116 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000172834.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.