Transcript: ENSDART00000172792.2 cp110-204

Description

centriolar coiled-coil protein 110 [Source:ZFIN;Acc:ZDB-GENE-141222-74]

Gene Synonyms

si:ch73-100l22.3

Location

Chromosome 11: 45,340,115-45,342,655 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 8 domains and features, is associated with 66 variant alleles and maps to 30 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000101309.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000162491.2	cp110-203	2614	822aa	ENSDARP00000130189.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4I9S3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000160904.2	cp110-202	829	276aa	ENSDARP00000137149.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000172792.2	cp110-204	751	251aa	ENSDARP00000142079.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000172962.2	cp110-205	479	126aa	ENSDARP00000142053.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000158434.2	cp110-201	451	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 751 bps, Translation length: 251 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000172792.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000172792.2 cp110-204

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Transcript: ENSDART00000172792.2 cp110-204

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