Transcript: ENSDART00000172750.2 slc2a3b-203

Location

Chromosome 16: 12,484,603-12,488,365 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 29 domains and features, is associated with 229 variant alleles and maps to 37 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000037861.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000174467.2	slc2a3b-205	1659	552aa	ENSDARP00000143692.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000019941.10	slc2a3b-201	2987	534aa	ENSDARP00000008780.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R1M7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000189863.1	slc2a3b-206	1506	501aa	ENSDARP00000144790.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000172750.2	slc2a3b-203	839	235aa	ENSDARP00000142465.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000157064.4	slc2a3b-202	2766	534aa	ENSDARP00000127714.1	Nonsense mediated decay	F1R1M7	-
ENSDART00000173194.2	slc2a3b-204	811	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 839 bps, Translation length: 235 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000172750.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000172750.2 slc2a3b-203

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000172750.2 slc2a3b-203

Summary

About Us

Get help

Our sister sites

Follow us