Transcript: ENSDART00000172747.2 si:ch211-277c7.7-201

Description

si:ch211-277c7.7 [Source:ZFIN;Acc:ZDB-GENE-160114-41]

Location

About this transcript

This transcript has 4 exons, is annotated with 2 domains and features, is associated with 22 variant alleles and maps to 33 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000172747.2	si:ch211-277c7.7-201	1119	156aa	ENSDARP00000142203.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LG25	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173146.2	si:ch211-277c7.7-202	752	156aa	ENSDARP00000142574.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LG25	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,119 bps, Translation length: 156 residues

Version

ENSDART00000172747.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.