Transcript: ENSDART00000172744.2 rtn4b-205

Description

reticulon 4b [Source:ZFIN;Acc:ZDB-GENE-030710-2]

Gene Synonyms

rtn6

Location

Chromosome 13: 216,631-226,109 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 31 domains and features, is associated with 101 variant alleles and maps to 140 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000104347.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000172677.2	rtn4b-204	3226	876aa	ENSDARP00000136327.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000161705.2	rtn4b-202	2586	861aa	ENSDARP00000135986.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000172744.2	rtn4b-205	2241	746aa	ENSDARP00000131624.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000158208.2	rtn4b-201	1971	656aa	ENSDARP00000140345.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000163902.2	rtn4b-203	1572	523aa	ENSDARP00000131948.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IF59	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,241 bps, Translation length: 746 residues

Version

ENSDART00000172744.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSDART00000172744.2 rtn4b-205

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Transcript: ENSDART00000172744.2 rtn4b-205

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