Transcript: ENSDART00000172721.3 eml1-207

Description

EMAP like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-156]

Gene Synonyms

CNG-modulin, eml1a, wu:fj01a06, zgc:153105

Location

Chromosome 17: 30,976,484-31,059,021 reverse strand.

About this transcript

This transcript has 24 exons, is annotated with 33 domains and features, is associated with 1864 variant alleles and maps to 384 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000042840.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000126414.4	eml1-202	3487	813aa	ENSDARP00000104791.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7EXY5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193865.1	eml1-210	6472	809aa	ENSDARP00000149673.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000172721.3	eml1-207	6463	840aa	ENSDARP00000137688.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9P088	-
ENSDART00000186930.1	eml1-209	6445	800aa	ENSDARP00000148317.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000185941.1	eml1-208	6037	817aa	ENSDARP00000148944.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RMY7	-
ENSDART00000104307.4	eml1-201	1528	281aa	ENSDARP00000095082.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000134998.2	eml1-203	539	101aa	ENSDARP00000117339.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000152016.3	eml1-206	515	171aa	ENSDARP00000126354.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000146197.2	eml1-205	653	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000141161.2	eml1-204	510	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 24, Coding exons: 24, Transcript length: 6,463 bps, Translation length: 840 residues

Version

ENSDART00000172721.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSDART00000172721.3 eml1-207

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Transcript: ENSDART00000172721.3 eml1-207

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