Transcript: ENSDART00000172690.2 PPFIBP1-201

Description

PPFIA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060503-47]

Location

Chromosome 18: 15,469,015-15,551,456 reverse strand.

About this transcript

This transcript has 27 exons, is annotated with 38 domains and features, is associated with 75 variant alleles and maps to 235 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000100057.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000172690.2	PPFIBP1-201	4086	1013aa	ENSDARP00000130515.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LUM4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000159915.2	PPFIBP1-202	2962	951aa	ENSDARP00000141577.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7ZVC4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000165279.2	PPFIBP1-203	960	319aa	ENSDARP00000138313.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 27, Coding exons: 26, Transcript length: 4,086 bps, Translation length: 1,013 residues

Version

ENSDART00000172690.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000172690.2 PPFIBP1-201

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Transcript: ENSDART00000172690.2 PPFIBP1-201

Summary

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