Transcript: ENSDART00000172511.2 si:ch211-1o7.2-202

Description

si:ch211-1o7.2 [Source:ZFIN;Acc:ZDB-GENE-141222-28]

Location

About this transcript

This transcript has 5 exons, is associated with 438 variant alleles and maps to 95 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000164195.2	si:ch211-1o7.2-201	899	246aa	ENSDARP00000135503.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IMF1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000172511.2	si:ch211-1o7.2-202	733	125aa	ENSDARP00000141925.1	Nonsense mediated decay	A0A0R4IX02	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 733 bps, Translation length: 125 residues

Version

ENSDART00000172511.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.