Transcript: ENSDART00000172485.2 nlrc3l-201

Description

NLR family, CARD domain containing 3-like [Source:ZFIN;Acc:ZDB-GENE-121214-346]

Gene Synonyms

si:zfos-2269b6.1

Location

About this transcript

This transcript has 7 exons, is annotated with 18 domains and features, is associated with 308 variant alleles and maps to 70 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000186320.1	nlrc3l-202	2767	806aa	ENSDARP00000153748.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IY81	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000172485.2	nlrc3l-201	2623	806aa	ENSDARP00000140535.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IY81	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 2,623 bps, Translation length: 806 residues

Version

ENSDART00000172485.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.