Transcript: ENSDART00000172446.2 stac3-202

Description

SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]

Gene Synonyms

zgc:91949

Location

Chromosome 9: 310,331-314,239 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 17 domains and features, is associated with 279 variant alleles and maps to 34 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000098883.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000163474.2	stac3-201	2837	334aa	ENSDARP00000133228.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DBR6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000187731.1	stac3-203	4566	332aa	ENSDARP00000147661.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000193970.1	stac3-204	4487	334aa	ENSDARP00000151899.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DBR6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000172446.2	stac3-202	721	207aa	ENSDARP00000131553.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 721 bps, Translation length: 207 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000172446.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000172446.2 stac3-202

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Transcript: ENSDART00000172446.2 stac3-202

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