Transcript: ENSDART00000172354.2 SUFU-201

Description

suppressor of fused homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6223]

Location

About this transcript

This transcript has 6 exons, is associated with 674 variant alleles and maps to 50 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000079356.8	SUFU-203	2748	485aa	ENSDARP00000133214.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000110141.6	SUFU-205	5605	472aa	ENSDARP00000136805.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9JRW8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000170160.2	SUFU-204	2748	485aa	ENSDARP00000136012.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000172354.2	SUFU-201	724	50aa	ENSDARP00000131692.1	Nonsense mediated decay	-	-
ENSDART00000150518.2	SUFU-202	976	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 2, Transcript length: 724 bps, Translation length: 50 residues

Version

ENSDART00000172354.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.