Transcript: ENSDART00000172276.2 zgc:163077-202

Description

zgc:163077 [Source:ZFIN;Acc:ZDB-GENE-070521-6]

Location

About this transcript

This transcript has 3 exons, is annotated with 49 domains and features, is associated with 176 variant alleles and maps to 141 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000172276.2	zgc:163077-202	2154	301aa	ENSDARP00000140507.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4VCH2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000169262.2	zgc:163077-201	1960	301aa	ENSDARP00000132558.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4VCH2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 2,154 bps, Translation length: 301 residues

Version

ENSDART00000172276.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.