Transcript: ENSDART00000172219.2 apoea-202

Description

apolipoprotein Ea [Source:ZFIN;Acc:ZDB-GENE-010724-18]

Gene Synonyms

ApoE-1, im:7036787, wu:fb69a05, zgc:110064

Location

About this transcript

This transcript has 4 exons, is annotated with 16 domains and features, is associated with 179 variant alleles and maps to 167 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000172219.2	apoea-202	1065	269aa	ENSDARP00000133853.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q503V2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000170826.2	apoea-201	781	74aa	ENSDARP00000137865.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,065 bps, Translation length: 269 residues

Version

ENSDART00000172219.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.