Transcript: ENSDART00000172097.2 b4galt4-203

Description

UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4 [Source:NCBI gene (formerly Entrezgene);Acc:492760]

Location

About this transcript

This transcript has 5 exons, is annotated with 10 domains and features, is associated with 347 variant alleles and maps to 207 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000167168.2	b4galt4-201	1928	353aa	ENSDARP00000139422.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ICJ7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000167301.2	b4galt4-202	1362	353aa	ENSDARP00000130823.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ICJ7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000172097.2	b4galt4-203	1242	206aa	ENSDARP00000132263.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,242 bps, Translation length: 206 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000172097.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.