Transcript: ENSDART00000172010.2 sdk2a-202

Description

sidekick cell adhesion molecule 2a [Source:ZFIN;Acc:ZDB-GENE-091008-1]

Gene Synonyms

si:ch211-148f13.1, zmp:0000000840

Location

About this transcript

This transcript has 36 exons, is annotated with 103 domains and features, is associated with 424 variant alleles and maps to 73 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000160789.2	sdk2a-201	6513	2170aa	ENSDARP00000139228.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000172010.2	sdk2a-202	5381	1793aa	ENSDARP00000139351.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 36, Coding exons: 36, Transcript length: 5,381 bps, Translation length: 1,793 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000172010.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.