Transcript: ENSDART00000172004.2 st3gal8-204

Description

ST3 beta-galactoside alpha-2,3-sialyltransferase 8 [Source:ZFIN;Acc:ZDB-GENE-050417-286]

Gene Synonyms

siat4, st3gal2-r2, st3gal2l, zgc:111788

Location

Chromosome 11: 26,569,531-26,577,209 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 323 variant alleles and maps to 111 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000007494.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000154349.3	st3gal8-203	1890	341aa	ENSDARP00000127954.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R1A7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000191733.1	st3gal8-205	1039	340aa	ENSDARP00000145002.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000002846.8	st3gal8-201	1026	341aa	ENSDARP00000008800.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R1A7	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000123094.3	st3gal8-202	787	218aa	ENSDARP00000104572.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R1I9	-
ENSDART00000172004.2	st3gal8-204	612	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 612 bps,

Version

ENSDART00000172004.2

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000172004.2 st3gal8-204

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Transcript: ENSDART00000172004.2 st3gal8-204

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