Transcript: ENSDART00000171959.2 hfm1-202

Description

helicase for meiosis 1 [Source:ZFIN;Acc:ZDB-GENE-061207-43]

Gene Synonyms

si:ch211-83f14.5

Location

About this transcript

This transcript has 29 exons, is annotated with 23 domains and features, is associated with 382 variant alleles and maps to 167 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000171959.2	hfm1-202	3475	1084aa	ENSDARP00000137345.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IN50	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000162295.2	hfm1-201	493	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 29, Coding exons: 28, Transcript length: 3,475 bps, Translation length: 1,084 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000171959.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.