Transcript: ENSDART00000171909.2 PACSIN3-204

Description

protein kinase C and casein kinase substrate in neurons 3 [Source:ZFIN;Acc:ZDB-GENE-040426-984]

Location

About this transcript

This transcript has 2 exons, is annotated with 5 domains and features, is associated with 310 variant alleles and maps to 188 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000165201.3	PACSIN3-201	2629	377aa	ENSDARP00000131278.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZUY8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000158518.3	PACSIN3-202	2581	435aa	ENSDARP00000138125.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M2BE23	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000170174.2	PACSIN3-203	307	102aa	ENSDARP00000140870.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000171909.2	PACSIN3-204	283	70aa	ENSDARP00000138886.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 283 bps, Translation length: 70 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000171909.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.