Transcript: ENSDART00000171831.2 MACROH2A2-201

Description

macroH2A.2 histone [Source:ZFIN;Acc:ZDB-GENE-050913-114]

Location

About this transcript

This transcript has 7 exons, is annotated with 16 domains and features, is associated with 123 variant alleles and maps to 50 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000121952.3	MACROH2A2-204	2001	367aa	ENSDARP00000105230.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4V914	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000159453.2	MACROH2A2-202	897	215aa	ENSDARP00000131192.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000171831.2	MACROH2A2-201	883	224aa	ENSDARP00000141526.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000158720.2	MACROH2A2-203	678	81aa	ENSDARP00000141394.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 883 bps, Translation length: 224 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000171831.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.