Transcript: ENSDART00000171752.2 pdcd4a-202

Description

programmed cell death 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1920]

Gene Synonyms

wu:fa55g03, wu:fb08a11, wu:fe01a02, zgc:66311

Location

Chromosome 1: 26,051,481-26,063,159 reverse strand.

About this transcript

This transcript has 7 exons, is associated with 84 variant alleles and maps to 41 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000021702.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000168640.2	pdcd4a-201	2853	467aa	ENSDARP00000131636.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QBM2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185348.1	pdcd4a-204	2620	467aa	ENSDARP00000148546.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QBM2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185187.1	pdcd4a-203	1524	467aa	ENSDARP00000147026.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QBM2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000171752.2	pdcd4a-202	901	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 901 bps,

Version

ENSDART00000171752.2

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000171752.2 pdcd4a-202

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Transcript: ENSDART00000171752.2 pdcd4a-202

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