Transcript: ENSDART00000171729.2 pkma-204

Description

pyruvate kinase M1/2a [Source:ZFIN;Acc:ZDB-GENE-031201-4]

Gene Synonyms

cb1029, fj33f03, pkm2, pkm2a, wu:fj33f03

Location

Chromosome 18: 907,266-925,917 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 3 domains and features, is associated with 656 variant alleles and maps to 12 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000099730.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000167229.3	pkma-202	2387	532aa	ENSDARP00000140346.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZVT2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000170888.2	pkma-203	2358	532aa	ENSDARP00000132638.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IGP6	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000193163.1	pkma-205	1602	532aa	ENSDARP00000153615.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZVT2	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000171729.2	pkma-204	325	89aa	ENSDARP00000131416.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000161206.2	pkma-201	312	66aa	ENSDARP00000130584.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 325 bps, Translation length: 89 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000171729.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000171729.2 pkma-204

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Transcript: ENSDART00000171729.2 pkma-204

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